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SRX251366: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-221896' containing sample 'Escherichia coli KOEGE 10 (25a)'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 966.4M bases, 489.3Mb downloads

UUID: c5f381bd-16ff-4adb-b6f1-ca21c8b3737a
Design: Illumina sequencing of Escherichia coli KOEGE 10 (25a) via random selection
Submitted by: Broad Institute (BI)
Study: E coli UTI Bacteremia
PRJNA186257 • SRP019618 • All experiments • All runs
Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli KOEGE 10 (25a)
SAMN01885867 • SRS402243 • All experiments • All runs
Organism: Escherichia coli KOEGE 10 (25a)
Library:
Name: Pond-221896
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Experiment attributes: (show all 12 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 290049.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:3VROB
material_type: DNA:DNA Somatic
product_order: PDO-291
product_part_number: P-MCV-0001
project: G30255
research_project: RP-192
root_sample_id: SM-2TD3F
sample_id: SM-3VROB
work_request: 35134
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2013-03-08 22:34:25.0GAPipelineRTA1.15.19.5Sequencer Application 1.6.8.6
Runs: 2 runs, 4.8M spots, 966.4M bases, 489.3Mb
Run# of Spots# of BasesSizePublished
SRR7856252,379,803480.7M243Mb2013-03-18
SRR7856262,404,341485.7M246.3Mb2013-03-18

ID:
351290

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